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1.
Viruses ; 14(2)2022 01 24.
Article in English | MEDLINE | ID: covidwho-1715759

ABSTRACT

A 67-year-old male veterinarian presented with fatigue, anorexia, and diarrhea. Although there were no tick bite marks, we suspected severe fever with thrombocytopenia syndrome (SFTS) due to bicytopenia, mild disturbance of consciousness, and a history of outdoor activities. Thus, we started immunoglobulin therapy immediately. A serum reverse transcription-polymerase chain reaction (RT-PCR) test for SFTS virus (SFTSV) was positive. The patient had treated a cat with thrombocytopenia 10 days prior to admission. The cat's serum SFTSV RT-PCR test result was positive, and the whole genome sequences of the patient's and cat's SFTSV were identical, suggesting the possibility of transmission from the cat to the patient. Other cases of direct cat-to-human SFTV transmission have been reported recently. Mucous membranes should be protected, including eye protection, in addition to standard precautions, when in contact with any cat with suspected SFTS.


Subject(s)
Cat Diseases/virology , Severe Fever with Thrombocytopenia Syndrome/transmission , Severe Fever with Thrombocytopenia Syndrome/virology , Aged , Animals , Cat Diseases/blood , Cats , DNA, Viral/blood , DNA, Viral/genetics , Humans , Male , Phlebovirus/classification , Phlebovirus/genetics , Phlebovirus/isolation & purification , Severe Fever with Thrombocytopenia Syndrome/blood , Severe Fever with Thrombocytopenia Syndrome/diagnosis , Veterinarians
2.
Transfus Med ; 31(5): 371-376, 2021 Oct.
Article in English | MEDLINE | ID: covidwho-1356901

ABSTRACT

BACKGROUND: Pathogen reduction technologies (PRT) based on nucleic-acid damaging chemicals and/or irradiation are increasingly being used to increase safety of blood components against emerging pathogens, such as convalescent plasma in the ongoing COVID-19 pandemic. Current methods for PRT validation are limited by the resources available to the blood component manufacturer, and quality control rely over pathogen spiking and hence invariably require sacrifice of the tested blood units: quantitative real-time PCR is the current pathogen detection method but, due to the high likelihood of detecting nonviable fragments, requires downstream pathogen culture. We propose here a new molecular validation of PRT based on the highly prevalent human symbiont torquetenovirus (TTV) and rolling circle amplification (RCA). MATERIALS AND METHODS: Serial apheresis plasma donations were tested for TTV before and after inactivation with Intercept® PRT using real-time quantitative PCR (conventional validation), RCA followed by real-time PCR (our validation), and reverse PCR (for cross-validation). RESULTS: While only 20% of inactivated units showed significant decrease in TTV viral load using real-time qPCR, all donations tested with RCA followed by real-time PCR showed TTV reductions. As further validation, 2 units were additionally tested with reverse PCR, which confirmed absence of entire circular genomes. DISCUSSION: We have described and validated a conservative and easy-to-setup protocol for molecular validation of PRT based on RCA and real-time PCR for TTV.


Subject(s)
DNA, Viral , Real-Time Polymerase Chain Reaction , Torque teno virus , Virus Inactivation , COVID-19/blood , COVID-19/genetics , DNA, Viral/blood , DNA, Viral/genetics , Humans , SARS-CoV-2/genetics , SARS-CoV-2/metabolism , Torque teno virus/genetics , Torque teno virus/metabolism
3.
Scott Med J ; 66(3): 108-114, 2021 Aug.
Article in English | MEDLINE | ID: covidwho-1117674

ABSTRACT

AIMS: To search for biochemical indicators that can identify symptomatic patients with COVID-19 whose nucleic acid could turn negative within 14 days, and assess the prognostic value of these biochemical indicators in patients with COVID-19. PATIENTS AND METHODS: We collected the clinical data of patients with COVID-19 admitted to our hospital, by using logistic regression analysis and AUC curves, explored the relationship between biochemical indicators and nucleic acid positive duration, the severity of COVID-19, and hospital stay respectively. RESULTS: A total of two hundred and thirty-three patients with COVID-19 were enrolled in the study. We found patients whose nucleic acid turned negative within 14 days had lower LDH, CRP and higher ALB (P < 0.05). ROC curve results indicated that lower LDH, TP, CRP and higher ALB predicted the nucleic acid of patients turned negative within 14 days with statistical significance(P < 0.05), AST, LDH, CRP and PCT predicted the severe COVID-19 with statistical significance, and CRP predicted hospital stay >31days with statistical significance (P < 0.05). After verification, the probability of nucleic acid turning negative within 14 days in patients with low LDH (<256 U/L), CRP (<44.5 mg/L) and high ALB (>35.8 g/L) was about 4 times higher than that in patients with high LDH, CRP and low ALB (P < 0.05). CONCLUSIONS: LDH, CRP and ALB are useful prognostic marker for predicting nucleic acid turn negative within 14 days in symptomatic patients with COVID-19.


Subject(s)
C-Reactive Protein/analysis , COVID-19/blood , DNA, Viral/blood , L-Lactate Dehydrogenase/blood , SARS-CoV-2/genetics , Serum Albumin/analysis , Biomarkers/blood , COVID-19/diagnosis , Female , Humans , Male , Middle Aged , Predictive Value of Tests , Prognosis , ROC Curve , Retrospective Studies , Time Factors
5.
Chem Commun (Camb) ; 57(9): 1125-1128, 2021 Feb 02.
Article in English | MEDLINE | ID: covidwho-1012695

ABSTRACT

Two fragments of the COVID-19 genome (specific and homologous) were used as two inputs to construct an AND logic gate for COVID-19 detection based on exonuclease III and DNAzyme. The detection sensitivity of the assay can reach fM levels. Satisfactory recovery values were obtained in real sample analysis.


Subject(s)
COVID-19 Testing , COVID-19/diagnosis , DNA, Viral/analysis , SARS-CoV-2/genetics , Saliva/virology , DNA, Catalytic , DNA, Viral/blood , DNA, Viral/urine , Exodeoxyribonucleases , Genome, Viral , Humans , Logic
6.
J Med Virol ; 92(11): 2785-2791, 2020 11.
Article in English | MEDLINE | ID: covidwho-959196

ABSTRACT

Previous studies reported that coronavirus disease 2019 (COVID-19) was likely to result in liver injury. However, few studies reported the impacts of COVID-19 on liver function in patients with chronic liver diseases. We aimed to describe a case series of COVID-19 patients with chronic hepatitis B virus (HBV) infection. Confirmed hospitalized COVID-19 patients from hospitals in 10 cities of Jiangsu province, China, were retrospectively included between 18 January 2020 and 26 February 2020. Demographic information, epidemiologic data, clinical features, and treatment data were extracted from medical records. Seven COVID-19 patients with chronic HBV infection were included. Six (85.7%) patients were male. The patients aged from 33 to 49 years. Two patients had HBV-related cirrhosis. One patient (14.3%) was positive for serum HBV e-antigen. On admission, 1 (14.3%) patient had mildly elevated alanine aminotransferase (ALT) level (>40 U/L) and 1 (14.3%) had elevated aspartate aminotransferase (AST) level (>40 U/L). The serum albumin level and platelet counts were decreased in two patients with HBV-related liver cirrhosis. Three (42.9%) patients had elevated ALT level and 2 (28.6%) patients had elevated AST level in hospitalization. However, the peak ALT and AST level during hospitalization was 51 U/L and 44 U/L, respectively. As of 29 February 2020, all patients were discharged. No patient was admitted to the intensive care units or developed liver failure during hospitalization. The abnormalities of liver function are not uncommon on COVID-19 patients with chronic HBV infection in our case series. However, no patient developed severe liver-related complications during hospitalization.


Subject(s)
COVID-19/virology , Coinfection/virology , Hepatitis B, Chronic/virology , Adult , Alanine Transaminase/blood , Antiviral Agents/therapeutic use , China/epidemiology , DNA, Viral/blood , Female , Hepatitis B e Antigens/blood , Hospitalization/statistics & numerical data , Humans , Liver/pathology , Liver/virology , Liver Cirrhosis/pathology , Liver Cirrhosis/virology , Liver Function Tests , Male , Medical Records , Middle Aged , Retrospective Studies , COVID-19 Drug Treatment
7.
J Viral Hepat ; 28(1): 89-94, 2021 01.
Article in English | MEDLINE | ID: covidwho-793304

ABSTRACT

A significant proportion of patients infected with SARS-CoV-2 develop severe respiratory symptoms due to an excessive immune response. Treatment of this condition may include immunosuppressive therapies, such as IL-6 receptor antagonists and corticosteroids, which pose a risk for patients with active or past hepatitis B virus (HBV) infection. In this prospective cohort study, we analysed the risk of HBV reactivation in patients with severe COVID-19 and resolved HBV infection undergoing immunosuppressive therapy. From 15th March to 30th April 2020, 600 patients with severe COVID-19 were admitted to our hospital and treated with immune modulators. Data regarding HBV infection were available in 484, of whom 69 (14%) were HBsAg negative/anti-HBc positive. For these patients, HBV reactivation prophylaxis with entecavir was strongly recommended. Complete follow-up was available in 61 patients: 72% were male, median age was 67 years, and anti-HBs was >10 IU/mL in 72%. The immunosuppressive drug most used was tocilizumab (72%). Despite HBV prophylaxis recommendation, 38 (62%) patients received entecavir and 23 (38%) did not. Baseline features of both groups were similar. At follow-up, we found no cases of HBsAg seroreversion and only 2 (3%) patients (no prophylaxis group) had detectable serum HBV-DNA (<15 IU/mL). Both were anti-HBs negative and had normal aminotransferase levels. Our data show that the risk of HBV reactivation in patients with severe COVID-19 and resolved HBV infection undergoing immunosuppressive treatment is low. However, if a systematic follow-up after hospital discharge is unfeasible in patients without anti-HBs, a short course of antiviral prophylaxis may be a safe option.


Subject(s)
COVID-19 Drug Treatment , Hepatitis B/virology , Immunosuppressive Agents/therapeutic use , Virus Activation/drug effects , Aged , Antiviral Agents/therapeutic use , COVID-19/complications , DNA, Viral/blood , Female , Hepatitis B/complications , Hepatitis B/prevention & control , Hepatitis B Antibodies/blood , Hepatitis B Core Antigens/immunology , Hepatitis B Surface Antigens/blood , Hepatitis B virus/immunology , Hepatitis B virus/physiology , Humans , Male , Middle Aged , Prospective Studies , Risk , SARS-CoV-2
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